The pipeline recipe vmImObs does bias subtraction with overscan removal, flat-fielding and cosmic rays removal. Images taken in the UBVRI filters are also
photometrically calibrated. Presently, the combination of images taken
in jitter mode is not pipeline supported. The photometric calibration consists of writing in the
header of the reduced image the zeropoint keyword (in ADU/sec):
"HIERARCH ESO PRO MAG ZERO", with its RMS: "HIERARCH ESO PRO MAGZERO RMS". The zeropoints are in general
obtained every night, but when the night determination is not available the
closest in time zeropoint is used. For the zeropoints determination see the
zeropoint page . The pipeline recipe also
converts the header keywords "HIERARCH ESO PRO SKY CCD" containing the sky to CCD
transformation into the "WCS" (World-Coordinate-System)
format readable by the "Mask-preparation Software"
and by Skycat. (The converted keywords are called "COi_j"). The pipeline recipe also
computes qc parameters (see below) and writes them in the reduced
image header.
Recipe Pre-Imaging
This recipe is only used for the quick-delivering data, and
for this purpose standard (not the latest) master calibrations are used.
Pre-imaging is taken in stare mode only. The pipeline recipe vmImPreImaging does bias subtraction with overscan removal, flat-fileding and converts
the header keywords "HIERARCH ESO PRO SKY CCD" into the "COi_j"
keywords readable by the "Mask-preparation Software".
Photometric calibration is not performed and QC parameters are not computed.
Products
| product name |
category (PRO CATG) |
content |
| r.<raw1name>_0000.fits |
IMG_SCIENCE_REDUCED |
reduced image |
| r.<raw1name>.log |
not applicable |
pipeline log file |
|
QC checks
As part of the quality control the following parameters are computed by the
pipeline imaging recipe and their value are stored in the header of the reduced image. More information on the qc parameters can be found on the qc pages
.
| header keyword name |
qc parameter |
| QC IMAGE QUALITY
|
image quality (arcsec) |
| QC IMAGE QUALITY ERROR |
error on image quality (arcsec) |
| QC SKYBACK |
sky background level (ADU/sec/px) |
| QC SKYBACK ERROR |
sky background level error (ADU/sec/px) |
| QC MAGLIM |
Limiting magnitude |
| QC MAGLIM ERROR |
error on limiting magnitude |
|
Image quality is computed as the mode of FWHM of all the objects
in frame classified as stars by SExtractor, when at least 10 stars are found.
Error on image quality is the sigma of FWHM of the objects classified as stars. It is computed iteractively, excluding from the distribution outliers at more than 3 sigma.
Sky background level is estimated by computing the median pixel
value in 100 regions of the frame each of 160x180 pixels, the mean of the 10 lowest values, divided by the exposure time is the estimate of the sky background in (ADU/px/sec).
Error on sky background level is the rms of the 10 lower values selected for the background level estimation.
Limiting magnitude in frame is computed as the position of the most populated bin of the star magnitudes histogram. Binsizes from 0.1 up to 1 magnitudes are
tried until the most populated bin contains at least 20 stars. If the 20 stars
level for the highest bin is never reached, the limiting magnitude is set to 0.
Error on limiting magnitude is the value of the binsize of the histogram used to determine the limiting magnitude.
MOS
The following FITS keys are relevant:
TPL ID = VIMOS_mos_obs_Offset (includes single and jitter mode)
DPR CATG = SCIENCE,
DPR TYPE = OBJECT,
DPR TECH = MOS
![[mosscirawLR_blue.gif 14K]](../img/mosscirawLR_blue.gif) |
Raw MOS science frame of quadrant 1 obtained with the LR_blue grism. There are 137 science slits and 3 reference
slits (two of them are visible at the left side and one at the right). Cleary visible are zero and -1 (minus one) order contaminations |
Recipe MOS
The pipeline recipe vmMosObsJitter does bias subtraction with overscan removal, flat-field correction
is presently not done because the red-grisms have fringing, and the blue ones have not yet understood
reflections that introduce artificial features in the science frame, when flatfielded. Then the shift in the wavelength direction with respect of some skylines is computed and applied to correct for flexures (the skylines used are listed in the header of the
input wavelength dispersion solution table "VI_PWDM..."
under the keywords "HIERARCH ESO PRO SKY WLENi"). The objects in slits are then detected, the detection threshold is set to 3 sigma, the
2-dimensional slit extraction is done using the distorsion models and the inverse dispersion solution read in the "VI_PWDM.." input table. The median sky level is subtracted and the two images
containing 2-dimensional object spectra and sky spectra are produced (r.<raw1name>_0001.fits
and r.<raw1name>_0002.fits respectively). These images are resampled to the constant wavelength interval listed in the header keyword "CDELT1" (5.27 A/pix for
the LR_blue grism), and the wavelength corresponding to the first pixel is
listed in the header keyword "CRVAL1" (3700 A for LR_blue). Then, in case of jittered data, the 2-dimensional products are stacked. Finally the 1-dimensional optimal extraction is applied (K. Horne1986, Pubs of the Astronomical Society of Pacific,98,609-617) and the result for each slit is stored in one row of the product image r.<raw1name>_0000.fits (note that sometimes, expecially in data with high-fringing, some spurious objects are extracted).
WARNING: at the moment the fringing correction is not pipeline supported.
Products
| product name |
category (PRO CATG) |
content |
| r.<raw1name>_0000.fits |
MOS_SCIENCE_REDUCED |
image containing 1-dimensional extracted object spectra (one-per-row) |
| r.<raw1name>_0001.fits |
MOS_SCIENCE_EXTRACTED |
image containing 2-dimensional extracted object spectra |
| r.<raw1name>_0002.fits |
MOS_SCIENCE_SKY |
image containing 2-dimensional extracted sky spectra |
| (since February 2005) r.<raw1name>_0003.fits |
MOS_SKY_REDUCED |
image containing 1-dimensional extracted sky spectra (one-per-row) |
r.<raw1name>_0004.tfits |
OBJECT_TABLE |
table containing position of object as refereed to 1-dim image r.<raw1name>_0000.fits |
| r.<raw1name>_0005.tfits |
WINDOW_TABLE |
table containing position of object as refereed to 2-dim image r.<raw1name>_0001.fits |
| r.<raw1name>.log |
not applicable |
pipeline log file |
|
 |
 |
Pipeline products obtained using the above MOS science frame (<raw1name>.fits). On the left the product "MOS_SCIENCE_EXTRACTED" r.<raw1name>_0001.fits, is shown. It contains the 2-dimensional reduced spectra of the objects found in each slit, the 1-dimensional extracted spectra are contained in the product MOS_SCIENCE_REDUCED r.<raw1name>_0000.fits (not shown). On the right is shown the product MOS_SCIENCE_SKY r.<raw1name>_0002.fits that contains the 2-dimensional reduced sky spectra that have been subtracted to the object spectra. Both images are resampled to the constant wavelength interval 5.27 A/pix and the starting wavelength is 3700 A. Clearly visible again in the sky spectra are second and zero order contaminations. The correspondence between slits in the raw and the reduced frame is that slits from bottom to top in the reduced frames correspond to
the slits counted from bottom to top and from left to right in the raw frame.
(WARNING for data taken before April 2004: due to an header problem, sometimes also reference slits
are reduced, they are easily recognized because the objects are very bright and they correspond to
the first spectra starting from the bottom in the reduced frame.
So to find the
correspondence between raw and reduced science spectra the reference
spectra has not to be taken into account).
|

Here is shown in better details a portion of the 2-dimensional reduced object spectra MOS_SCIENCE_EXTRACTED r.<raw1name>_0001.fits. 8 slits are visible (separated by the black lines) containing object spectra. The slits have been extracted from the raw frame following the curvature model, and they have been
resampled to a constant wavelength step (for the LR_blue grism it is 5.27A/pix).
On the right is shown the 1-dimensional spectrum of one of the objects obtained by plotting the corresponding row of the product MOS_SCIENCE_REDUCED r.<raw1name>_0000.fits. The zero order contamination,
when saturated, can not be
removed, therefore the apparent emission line at 4900A in the
extracted spectrum is caused by that, while the emission at 5450A is real.
|
-  | Here is shown the portion of the 2-dimensional sky product (MOS_SCIENCE_SKY r.<raw1name>_0002.fits) corresponding to the object spectra above. The third and the seventh slits (from the bottom to the top) show zero
order contamination, while the second slit shows -1 (minus one) order contamination.
The bright sky on the blue end of the seventh
spectrum is caused by the spectral extraction
overlapping the wavelength range of the next multiplexed slit
The 2-dimensional extracted sky image
also indicates the quality of the wavelength calibration applied to the science frame. This is done by checking the
alignment of the skylines in all slits, and by comparing the wavelengths of some of them with their known value.
The wavelength range of blue grisms is poor of strong skylines, and they are all in the redder part of the spectrum.
Here are visible the OI lines at 5577.4 and 6299.7,6363.6
and a NaI blend at 5891.6
|
The product WINDOW_TABLE (r.<raw1name>_0005.tfits) refers to the 2-dimensional extracted spectra (MOS_SCIENCE_EXTRACTED r.<raw1name>_0001.fits and MOS_SCIENCE_SKY r.<raw1name>_0002.fits) and contains the following columns:
| column name |
description |
| SLIT |
slit number |
| SPEC_START |
pixel position (Y) of the first row of the slit in r.<raw1name>_0001.fits and r.<raw1name>_0002.fits |
| SPEC_END |
pixel position (Y) of the last row of the slit in r.<raw1name>_0001.fits and r.<raw1name>_0002.fits |
| OBJ_NO |
sequential number of object in slit (they may be more than one) |
| OBJ_START |
pixel position (Y) of the first row of object relative to SPEC_START |
| OBJ_END |
pixel position (Y) of the last row of object relative to SPEC_STAR |
| OBJ_POS |
pixel position (Y) of object relative to SPEC_STAR |
| OBJ_X |
mask X coordinate of object (mm) (0,0 is the coordinate of the mask center) |
| OBJ_Y |
mask Y coordinate of object (mm) |
|
The product OBJECT_TABLE (r.<raw1name>_0004.tfits) refers to the 1-dimensional extracted spectra (MOS_SCIENCE_REDUCED r.<raw1name>_0000.fits) and contains the following columns:
| column name |
description |
| SLIT |
slit number |
| Y |
pixel position (Y) of spectrum in r.<raw1name>_0000.fits |
OBJ_NO |
sequential number of object in slit (they may be more than one) |
| OBJ_X |
mask X coordinate of object (mm) (0,0 is the coordinate of the mask center) |
| OBJ_Y |
mask Y coordinate of object (mm) |
|
IFU
The following FITS keys are relevant:
TPL ID = VIMOS_ifu_obs_Offset (includes single and jitter mode)
DPR CATG = SCIENCE,
DPR TYPE = OBJECT,
DPR TECH = IFU
![[ifusciraw.gif 14K]](../img/ifusciraw.gif) |
Raw IFU science frame of quadrant 2 obtained with the HR_red grism. Redder wavelengths are toward the top. In this image and in all the data obtained with High/Medium Resolution grisms, only the central pseudo-slit is used (i.e. 400 exposed fiber). In Low Resolution, instead,
all four pseudo-slits are used (i.e. 1600 exposed fibers). |
Recipe IFU
The pipeline recipe vmifuscience is used to reduce each single IFU science exposure. In addition to a raw science exposure the recipe requires a
master bias, an inverse dispersion solution file (file name tag: PWDF),
a fiber relative transmission file (file name tag: PTNF) and a file containing
information on the tracing of the fibers ( file name tag: PTCF). The last three files are obtained with the recipe vmifucalib using arc-lamps and flat-field frames which belong to the
NightCalibration template associated to the science exposure.
The recipe starts with doing bias subtraction. Then, refines the
input tracing file (PTCF) using the brightest fiber of the science exposure
and refines the input inverse dispersion solution file (PWDF) using the position of some identified sky-lines. The spectra are then extracted, wavelength calibrated and resampled to a constant wavelength step (written in the keyword CDELT1). The extracted spectra are also corrected for the relative differences in fiber transmission (using the input relative transmission file with tag PTNF) and finally stored in the
output image in the ususl order: sucessively from pseudo-slit1 to pseudo-slit4
counting fibers from left to right.
Flat fielding and fringing correction are not done.
The extracted fiber spectra image is then used together with the
appropriate IFU table to reconstruct the image of the field of view.
The extracted spectra are integrated in a predefined wavelength range, chosen where the spectra are brighter and excluding zero order contaminations, and the value obtained are stored in the corresponding positions on the IFU head.
Products
| product name |
category (PRO CATG) |
content |
| r.<rawname>_0000.fits |
IFU_FOV |
reconstructed field of view image |
| r.<rawname>_0001.fits |
IFU_SCIENCE_REDUCED |
image containing the extracted fiber spectra |
| r.<rawname>.log |
not applicable |
pipeline log file |
|
Here is shown
the product image, PRO CATG: IFU_SCIENCE_REDUCED, obtained with the
raw image shown above. The extracted fiber spectra are 400 and
the spectrum of the fiber 352 is plotted on the top.
The spectra are resampled to the constant wavelength interval
listed in the header keyword CDELT1. CDELT1 is 0.58 A/pix in this image taken
with the HR_red grism.
The spectral signal is given in ADU per wavelength interval, then, to have
the signal per Angstom one should divide the spectrum by CDELT1.
Clearly visible are sky emission and absorption lines. The position of some sky emission lines are also used during the QC checks to control the wavelength calibration.
|
| Product image (PRO CATG: IFU_FOV) of the reconstructed field of view of quadrant 2.
The reconstructed image of each single quadrant has the dimension of the 4-quadrant field of view (here 40x40) and
is filled of zeros in the regions corresponding to the other quadrants (black regions in figure).
Here, in High Resolution,
only the 400 fibers of the central pseudo-slit are used that correspond to a 20x20 region of the
IFU head. In Low Resolution all the 4 pseudo-slits with 1600 fibers are used
corresponding to a region 40x40 of the IFUhead.
The mapping between the spectra position in the extracted spectra image and the corresponding
points of the reconstructed field-of view image is given in the IFU tables .
|
| Reconstructed image of the 4 quadrants field of view.
The 4 quadrant image is the product of the vmifucombine recipe, that simply sums the four single quadrant images. This product was delivered
in the SM packages until period 74 and was called IFUima<rawname>_0000.fits . The black regions correspond to dead fibers.
In High/Medium resolution the 4-quadrants
reconstructed image has size 40x40. In Low Resolution, instead, the size
of the 4-quadrant image is 80x80.
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